Complexity Digest 2000.12

20-Mar-2000

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  1. When is "Now"?, Science Next Article Bookmark and Share

    There have been a number of observations that lead to the conclusion that our sensory apparatus works in a much more active than technical recording devices like microphones and cameras. It appears that anticipation in the sense of continuous forecasting or prediction about what is going to happen on the sensory input level is an essential part of our strategy to successfully interact with a quickly changing environment.

    A classic example where that can be demonstrated is the flash-lag illusion: An object is moving in the visual field, at one point a flash appears at the same location but it is perceived as lagging behind the moving object. One interpretation of that phenomenon is that we "see" the moving object where it would be if it followed the trajectory and that therefore the visual system is predictive. Another interpretation is that moving objects are perceived faster than resting stimuli in the sense that our perception of the resting flash in further in the past than that of the moving object.

    Eagleman and Sejnowski conducted a series of experiments that are inconsistent with both interpretations. At the same time they could pinpoint the moment of our subjective "now": What we see as happening "now" depends on what happened during the time interval of 80ms after (!) the occurrence of visual event.

    In their experiments the researchers basically modified the direction of the movement at the moment of the flash. For instance when the object stops moving at the moment of the flash, then we perceive it at the same location as the flash and not where we would expect it if it had followed the original trajectory.

    From an evolutionary standpoint this finding makes sense: After an event happened at a certain moment, we still have 80ms to take into account what happened next before we perceive it and start interpreting the event. It is to be expected that these exciting results from our visual interface to the world will have profound endo-physics implications.

    Motion Integration and Postdiction in Visual Awareness , David M. Eagleman, Terrence J. Sejnowski, Science, Volume 287, Number 5460,pp. 2036 - 2038, 2000

  2. Rare Meteorite Promises Glimpse Into Dawn Of Creation, CNN Next Article Bookmark and Share

    Al least since the series of movies like Deep Impact, describing collisions of asteroids with planet earth, we are aware of the real possibility of direct encounters with large objects from outer space. One meteor with the estimated impact energy of several kilotons of TNT (the Hiroshima bomb had an explosive yield of about ten kilotons) burst into a fireball over the Yukon in January. Fragments of the meteorite were found by an anonymous collector and kept frozen in a plastic bag.

    This turned out to be a lucky incidence for science since in that condition volatile gases are preserved and can be analyzed. (In other meteors only tiny gas fragments can be analyzed that got trapped in "Buckyballs". Question: How did they get in there? Are we sure these are just gas molecules and not galaxies like the one on Orion's belt?) It is the first time ever, that a meteor fragment was preserved and kept frozen in a state similar to extra-terrestrial conditions.

    These meteor fragments are especially precious since they belong to a rare (2%) type of meteor made out of " carbonaceous chondrite". This material contains a number of different organic compounds, ingredients of the primordial soup from which living systems emerged.

    The analysis of the 4.5 billion year old fragment will give us valuable information about the "dawn of creation" and will answer questions about the chance of finding extra-terrestrial life. It also will provide us with new insights into the possibility that life on earth originally was spawned from outer space.


  3. Scaling In Athletic World Records, Nature Next Article Bookmark and Share

    In physics, scaling laws of phase transitions describe some universal properties of the system under investigations (see also ComDig 2000.0.1). More recently Feigenbaum could show that transitions from order to chaos can take place through a "period-doubling" scenario that also shows universal scaling properties. The importance of these insights lies in the fact that universal properties would not change even if the underlying microscopic laws would be modified. This feature of complex systems implies that a reductionistic analysis of microscopic laws does not really help in understanding the behavior of the macroscopic system.

    Critical scaling phenomena have not found a lot of attention in biological systems with the exception of scaling properties of the size of biological organisms (see ComDig 2000.3.1.3).

    Savaglio & Carbone study scaling properties of human performance and they find some scaling behavior that seems to be universal as well in the sense that the same critical exponents are observed for different people independent of their individual characteristics, apparently not even dependent on their gender. The researchers investigated the data from world speed records on land (running) and in water (swimming) over different standard distances. The 100m Olympic running distance was excluded because the average speed is too much influenced by the start. They asked how the average speed depends on the length of the race. It is intuitive that longer races tend to be run slower but it was not known before how exactly fatigue slows runners and swimmers down over time.

    The astonishing results indicate that there seem to be two different universal scaling exponents involved: As one would expect from intuition, the average speed of a 800m race is relatively much slower than that of a 200m race compared to the speed difference between, say, between races of 800m and 5000m. For men the speed records for the three distances are 37:28:24 km/h i.e. the average speed in a 200m race is about 30% faster than in a 800m race but only about 15% slower in a 5000m race.

    This difference is a consequence of the fact that there is a "crossover" in scaling behavior between two and three minutes of running/swimming. This is in nice agreement with the well-known fact that at about that time the body switches from anaerobic to aerobic metabolism.


  4. Reforming the Patent System, Science Next Article Bookmark and Share

    Science and technology in modern society can be seen as complex adaptive system with a tremendous economic and social impact. The fastest growing stocks are most often technology related mainly in the areas of the Internet, and biotechnology. There are few groups within the US society that grow faster than research outcomes one of them are intellectual property lawyers. The legal costs connected to technological progress are stunning: lawyer's costs to obtain a patent are around US$ 10,000 litigation costs (per site) easily exceed US$ 1.5 million.

    From complex systems we know that if one mode becomes unstable and grows faster than other modes it tends to become an order parameter and will dominate the dynamics of the systems. In that sense patents laws play an important role in the fitness landscape of research and innovation. It is in the clear interest of patent lawyers that the number of patent grows as fast as possible, independent of the content and qualities of the patents. Secondly, from a lawyer's perspective the patents should be as broad and unspecific as possible so that many competitors have a choice of either to infringe the patent, pay a licensing fee, or go to court. The latter option certainly the most favorable for the lawyers.

    Barton suggests a number of changes that he thinks will be more in the interest of innovative progress and also in the interest of society: raise the standards for issuing patents, protect research by providing them with ways to use patented results as long as it is not exploited economically, and lastly to make it easier to legally challenge patents that have been issued by mistake or are otherwise invalid.


  5. Dynamics of Trust and Exclusion in Networks, SFI Working Papers Next Article Bookmark and Share

    Abstract: Networks such as ethnic credit associations, close-knit residential neighborhoods, 'old boy' networks, and ethnically linked businesses play an important role in economic life but have been little studied by economists. These networks are often supported by cultural distinctions between insiders and outsiders and engage in exclusionary practices which we call parochialism.

    We provide an economic analysis of parochial networks in which the losses incurred by not trading with outsiders are offset by an enhanced ability to enforce informal contracts by fostering trust among insiders.

    We first model one-shot social interactions among self-regarding agents, demonstrating that trust (i.e., cooperating without using information about one's trading partner) is a best response in a mixed-strategy Nash equilibrium if the quality of information about one's partner is sufficiently high. We show that since larger networks have lower quality information about specific individuals and greater trading opportunities, there may be an optimal (payoff-maximizing) network size.

    We then model the growth and decline of networks, as well as their equilibrium size and number. We show that in the absence of parochialism, networks may not exist, and the appropriate level of parochialism may implement an optimal network size. Finally, we explore the welfare implications and reasons for the evolutionary success of exclusion on parochial and other grounds.


  6. Evolution and Ecology, NECSI publication Next Article Bookmark and Share

    A historical dispute in the conceptual underpinnings of evolution is the validity of the gene centered view of evolution. We transcend this debate by formalizing the gene centered view as a dynamic version of the mean field approximation. This establishes the conditions under which it is applicable and when it is not. In particular, it breaks down for trait divergence which corresponds to symmetry breaking in evolving populations.

    Using this understanding, we study the role of spontaneous pattern formation in the creation and maintenance of biological diversity. Preliminary analysis and simulations demonstrate that spontaneous pattern formation in the presence of disruptive selection increases the generation and duration of genetic diversity. These patterns interact with boundary and internal barrier structure so as to generate counter-intuitive increases in diversity in patches with high perimeter-to-core ratios. This effect is increasingly pronounced for organisms that exhibit a restricted mating neighborhood.

    The approach we use merges methodologies from statistical physics with models of evolutionary processes. The appearance of spontaneous pattern formation in spatially distributed populations is directly analogous to symmetry breaking and coarsening in conventional physics models, e.g. Ising models of magnets. Thus, our approach is an extension of the methods developed in the study of correlations in systems that undergo phase transitions through symmetry breaking.

    This research has immediate implications for the design of protected habitats that can maintain or reverse the current dramatic decrease in biodiversity. Moreover, this approach may provide a new theory of both the origins of diversity and the mechanisms of sympatric speciation.


  7. Phase Transitions in a Model of Internet Traffic, SFI Working papers Next Article Bookmark and Share

    Abstract: In a recent study, Ohira and Sawatari presented a simple model of computer network traffic dynamics. These authors showed that a phase transition point ispresent separating the low- traffic phase with no congestion from the congestion phase as the packet creation rate increases. We further investigate this model by relaxing the network topology using a random location of routers.

    It is shown that the model exhibits nontrivial scaling properties close to the critical point, which reproduce some of the observed real Internet features. At criticality the net shows maximum information transfer and efficiency. It is shown that some of the key properties of this model are shared by highway traffic models, as previously conjectured by some authors. The relevance to Internet dynamics and to the performance of parallel arrays of processors is discussed.

    Introduction: The exchange of information in complex networks and how these networks evolve in time has been receiving increasing attention by physicists over the last years. In particular, it has been shown that the growth dynamics of the World Wide Web (WWW) follows some characteristic traits displayed by generic models of growth in random graphs. The presence of scaling in the distribution of connections between nodes of the WWW or in the number of pages per web site are consistent with other analyses involving the dynamical patterns displayed, such as the download relaxation dynamics which also decays as a power law.


  8. Pushing The Frontiers Of Interdisciplinary Research, Nature Next Article Bookmark and Share

    In a complex adaptive systems context innovation can be seen as an evolutionary process that takes place on a number of different time-scales: There is local adaptation following the slope of a fitness landscape, there is crossover which expands the dimension of the fitness landscape and there are random mutations which has no limitations in terms of dimensions of fitness landscapes but which therefore is also happening at the slowest time-scale. For innovation in scientific research similar rules seem to apply: It proceeds within given scientific disciplines until the toolbox of that discipline is exploited and progress slows down. Cross-fertilization from other disciplines is often successful because it allows experts in their discipline to see a problem from a new angle and how it is solved in different contexts with the tools of other disciplines.

    In the early eighties this insight led to the formation of a number of interdisciplinary centers at government laboratories (e.g. the Center for Non-Linear Studies of the Los Alamos National Laboratory) and at universities (e.g. the Center for Complex Systems Research at the University of Illinois in Urbana Champaign).

    It turned out, however, that just putting experts with "strong departmental background" into the same room and make them talk to each other (with the carrot of new funds as incentive) was in most cases not overwhelmingly successful and collaborations were rather superficial if they happened at all.

    In the more than fifteen years of that first round of experiments in interdisciplinary research non-linear science and complexity research has made impressive progress with new insights into many different areas of research.

    It was recognized that complex systems show new emergent properties that are not just linear super-positions of results from the traditional disciplines. In spite of that success academic hiring practices largely continued to count publications in narrow, discipline-specific journals and contributions in interdisciplinary research was not often considered to be very relevant for the decisions of recruiting committees.

    Today it seems that biology has reached a threshold for their traditional methods and needs to find crossover with methods from more quantitative disciplines. Since biology is intrinsically dealing with complex adaptive systems one might hope that it is recognized that for successful collaboration a solid understanding of complex and non-linear systems is indispensable.


  9. Systems Thinking and Modeling for a Complex World, NECSI book Next Article Bookmark and Share

    From the preface:

    This book introduces you to system dynamics modeling for the analysis of policy and strategy, with a focus on business and public policy applications. System dynamics is a perspective and set of conceptual tools that enable us to understand the structure and dynamics of complex systems. System dynamics is also a rigorous modeling method that enables us to build formal computer simulations of complex systems and use them to design more effective policies and organizations. Together, these tools allow us to create management flight simulators-microworlds where space and time can be compressed and slowed so we can experience the long-term side effects of decisions, speed learning, develop our understanding of complex systems, and design structures and strategies for greater success.

    Features and Content University and graduate-level texts, particularly those focused on business and public policy applications, have not kept pace with the growth of the field. This book is designed to provide thorough coverage of the field of system dynamics today, by examining

    • Systems thinking and the system dynamics worldview;
    • Tools for systems thinking, including methods to elicit and map the structure of complex systems and relate those structures to their dynamics;
    • Tools for modeling and simulation of complex systems;
    • Procedures for testing and improving models;
    • Guidelines for working with client teams and successful implementation.

    You will learn about the dynamics of complex systems, including the structures that create growth, goal-seeking behavior, oscillation and instability, S-shaped growth, overshoot and collapse, path dependence, and other nonlinear dynamics. Examples and applications include

    • Corporate growth and stagnation,
    • The diffusion of new technologies,
    • The dynamics of infectious disease such as HIV/AIDS,
    • Business cycles,
    • Speculative bubbles,
    • The use and reliability of forecasts,
    • The design of supply chains in business and other organizations,
    • Service quality management,
    • Transportation policy and traffic congestion,
    • Project management and product development,
    • and many others.

    The goal of systems thinking and system dynamics modeling is to improve our understanding of the ways in which an organization's performance is related to its internal structure and operating policies, including those of customers, competitors, and suppliers and then to use that understanding to design high leverage policies for success. To do so this book utilizes

    • Process Points that provide practical advice for the successful application of the tools in real organizations.
    • Case studies of System Dynamics in Action that present successful applications ranging from global warming and the war on drugs to reengineering the supply chain of a major computer firm, marketing strategy in the automobile industry, and process improvement in the petrochemicals industry.
  10. Common Ancestry Of Monkeys, Apes And Humans, Science Daily/NIU Next Article Bookmark and Share

    Excerpts: For the first time, scientists have discovered skeletal parts of an extinct primate that documents an early phase in the evolution of monkeys, apes, and humans. (…) Co-author Christopher Beard said the latest discovery is important because it helps fill a major gap in the fossil record of humans and their nearest relatives. "I hate to use the term 'missing link' because it's such a cliche, but these fossils really do fill a wide gap that previously separated higher primates, also known as anthropoids, from their prosimian relatives," said Beard, who coordinates the American side of the joint Sino-American expeditions that resulted in new fossil discoveries. Living anthropoids include monkeys, apes and humans. Living prosimians include lemurs, bush babies, lorises and tarsiers.

    The evolutionary origin of higher primates has stymied paleontologists and primatologists for decades, because so little was known regarding the ancestral anthropoid lineage until recently. Modern primates possess a variety of anatomical adaptations for moving through their environment--usually the trunks and branches of trees in tropical and subtropical forests. Many prosimians are renowned for their ability to leap and cling to vertical tree trunks, while monkeys tend to walk on all fours on the tops of branches. The anatomy of the fossilized ankle bones of Eosimias show that this animal already preferred walking quadrupedally on the tops of branches like living monkeys. In addition to verifying that Eosimias is an early higher primate, the new fossils help settle a longstanding debate about where the anthropoid lineage arose on the primate family tree.

    Previously, there were three main hypotheses regarding the nearest relatives of anthropoids. Based on similarities in the anatomy of their teeth, some scientists have argued that anthropoids evolved from the lemur-like adapids. Genetic similarities and the anatomy of living primates lead other scientists to believe that living and fossil tarsiers are the nearest evolutionary cousins of anthropoids. A third hypothesis accepts an evolutionary relationship between anthropoids and tarsiers, but posits that the split between these two lineages is very ancient, dating to at least 55 million years ago. The new ankle bones of Eosimias are similar to those of anthropoids and fossil omomyids, a group widely believed to be extinct relatives of tarsiers. "The oldest known skeletal remains of a higher primate are inconsistent with the view that monkeys, apes and humans evolved from the lemur-like adapids," Beard said, "but they support a close evolutionary relationship between anthropoids and tarsiers."

    Scientists recovered the fossils from a commercial limestone quarry about 100 miles west of Shanghai and from a locality in Shanxi Province (China), along the Yellow River, about 350 miles southeast of Beijing. The location of the discovery also is significant, the researchers say. "Most scientists in my field believe that if the ancestor of anthropoid primates is to be found then it should come from Africa," Gebo said. "Thus, the bones of Eosimias are important, as is its unusual location (Asia)." The new fossils were recovered during a series of expeditions organized by scientists from Carnegie Museum of Natural History in Pittsburgh, Pennsylvania and the Institute of Vertebrate Paleontology & Paleoanthropology in Beijing.


  11. Genomic Medicine And The Future Of Health Care, Science Next Article Bookmark and Share

    One of the defining characteristics of complex systems is the fact that simple rules lead can lead to complicated or even chaotic forms and behaviors. Especially systems that include the possibility of chaotic attractors are typically "structurally unstable" in the sense that tiny changes in the rules or initial conditions can lead to qualitatively completely different outcomes. Nevertheless there are sometimes universal properties of the system that allow fairly good predictions of the outcomes that are to be expected for certain types of changes in the simple rules.

    A similar situation can be found in the developments of biological organisms: The relative simple rules encoded in the genome lead to the vast complexity of the organism and its functions. When some of these functions fail or if some cells grow out of control of the rest of the organism, we call that a disease. The big challenge for the new biology is genomic medicine, i.e. to figure out how the genetic rules are linked to a healthy organism.

    From science fiction movies we know the risks of genetic screening of infants into alpha and gamma humans. Sander points out a number of benefits for the individual if that genomic link can be made: Not only can we be warned about what genetic diseases we have an increased risk to develop. One of the first applications of genomic medicine most likely will not be genetic drugs but a genetic diagnostic health monitoring system. We can have a personalized health care in that we can screen the genetic expressions in our body around the clock and via Internet screen for signals that indicate the symptoms of a developing disease. Everyone knows about the importance of early diagnostics but with such a system new forms of "chrono-medicine" might become feasible. Since gene expression changes continuously during the day, we have to expect that potent medicines will have very different effects depending on the gene-expression state of the organism. Therefore timing of the medication could make a tremendous difference.

    The bottom line is that biology and medicine will enter an "information-age" and we know from our experience that in increased access to information rests tremendous power. Therefore a challenge will be to make sure that the risk for misuse of this new genomic information will be minimized.


  12. Links & Snippets Next Article Bookmark and Share

    This is an experimental column with items that don't fit into the standard framework of the Complexity Digest. We want to include "snippets" like letters to the editor and conference announcements and "links" to complexity related websites with brief comments and short excerpts (< 80 words) that are permitted by copyright laws.

    1. The Rural Life At the Edge of Order, New York Times Next Article Bookmark and Share

      "The article struck me as an illustration of the penetration of complexity ideas into general literature without necessarily knowing that there is a specialized study." (Dean LeBaron)

      Excerpt: "When the snow went away -- in a rush, just as it came -- it left behind the lawn, the garden, the pastures, the barnyard. It also left behind locust pods, fallen branches, last fall's leaves, snowplow scrapings, mire and muck -- the debris of a disordered season. The snow's erasure has itself been erased. Everything is matted to the earth or anchored in the mud except the ridges an eastern mole has made while tunneling round and round. "


    2. Tangible Complexity, Letter Next Article Bookmark and Share

      I Interest and awareness in issues of complexity and chaos is increasing rapidly. Recently the popular press has been reaching large audiences with books like "The Tipping Point" From an research point of view many of these books have not achieved academic depth and consequently will not make it into the list of references of academic papers. On the other hand, the Amazon.com sales rank (currently 16!) of "The Tipping Point" suggest that there is a strong interest of the general public in issues of complexity. At the same time interactive simulation games such as SimCity and more recently the Sims (see previous announcement) have been huge sales successes.

      In more than one way these books and software titles have made the issue of complexity a more tangible one. We are all surrounded by complexity but now, through the playful interaction with agent-based simulations, complexity becomes a more tangible concept. Even through the limited sense of interacting with artificial worlds we can experience the intricate relationships between causes and effects in complex worlds in ways impossible without computers.

      One step further, making complex systems even more tangible, is to build end-user oriented simulation authoring tools allowing people to build their own agents from the ground up. One such tool is AgentSheets. AgentSheets allows a wide variety of users ranging from elementary school kid to scientists to build their own interactive simulations. End-user programming requires new programming paradigms. AgentSheets employs a means of programming called Tactile Programming. The behavior of individual agents is defined by user defined rules. Conditions let agents react to mouse and key events, check attributes and even let agents read web pages in real time. Actions allow agents to animate themselves, move around in a simulation world, play MIDI music, play sounds, speak, open web pages, and compute equations. Pressing a single button finished simulations can be turned into interactive web pages based on Java applets. Simulations can also be exported as JavaBean components connectable to other JavaBeans

      To make complexity even more tangible and enable a social understanding of complexity it is necessary to allow users to exchange computational artifacts easily. Through the Behavior Exchange AgentSheets users can upload and download agents. For instance elementary school kids have explored Ecoworlds as complex systems by designing their own animals, exchanging them with other kids and testing the sustainability of the aggregate system. How tangible are these complex systems for the kids? Using language such as "I will eat the bird" the kids commonly blur the distinction between their creations and themselves. In effect they project themselves into the artificial computer world and, in so doing, experience complex systems from within.

      Research papers on AgentSheets and how it is used can be found here.


    3. From Neural Nets to Agricultural Soils, Announcement Bookmark and Share

      "Applied Complexity" is the fifth of a series of conferences on Complex Systems in Australasia and the first in New Zealand expanding the international tradition of these conferences and expecting a wide participation from around the world.

      This conference will bring together the abstract with the realistic and show advances in complex system theory and modeling which have been applied to real world situations.

      Areas of interest: mathematics, computing, modelling, physics, chemistry, chaos, information theory, artificial intelligence, self-organizing systems, climatology, agriculture, biology, psychology, neural sciences, information sciences, social sciences, anthropology, ethnobiology, economics, modeling, conservation, and management to cite only a few at a broad level. Papers presented must deal explicitly with issues that suggest the extraction of broad rules of behaviour applicable across a variety of complex systems.


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