Complexity Digest 2000.24

12-Jun-2000

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  1. Economic Incentives for Rain Forest Conservation, Science Next Article Bookmark and Share

    Most of us would agree that a clean air and a healthy environment are valuable goods that we all share. Because of the global impact on the climate most nations have agreed in the Kyoto Protocol (a treaty of the United Nations Framework Convention on Climate Change) that a reduction of greenhouse gases (GHG) in the atmosphere is of global value. There was an agreement to put ceilings on GHG emissions for each country. Most industrial nations already exceed these ceilings whereas many developing nations have the option to increase their own GHG emissions or under the Clean Development Mechanism (CDM) trade their emission rights with developed nations if it leads to a "certified emissions reductions". The hope was that putting an economic market value on reduction of GHG emissions would create incentive to reduce emissions or even sequester some of the greenhouse gases (e.g. by converting CO2 into biomass) from the atmosphere. The difficult question is how preventing deforestation could indeed lead to a reduction of GHGs in the atmosphere:
    "Kremen et al. (3) demonstrate that the formal adoption of forest carbon markets (as proposed under the Kyoto Protocol) by the international community could dramatically increase incentives for developing nations to protect forests. (…) From the standpoint of the local inhabitants and the global community, the financial benefits from designation of the park outweigh those provided by logging. In contrast, at the national level, the state would benefit more by offering logging concessions. (…) However, Kremen and co-workers demonstrate that establishing the Masaola National Park would still be financially preferable for the state provided it received compensation for the reduction in GHG emissions associated with this forest conservation project."

    The researchers estimated that for less than $4.34 per metric ton of carbon the Masaola National Park could be used as an installation for sequestering CO2 from the atmosphere. This is an important pilot example that shows other countries with tropical rainforests that it might indeed be more profitable for them to invest in their rainforests as atmospheric cleaning centers instead of burning and cutting them down for dubious agricultural projects. This strategy could work if the preservation of rainforests is indeed internationally accepted as one of the Clean Development Mechanism.


  2. Potential Impacts Of Climate Change On U.S., U.S. National Assessment Next Article Bookmark and Share

    Excerpt: "The U.S. Global Change Research Program today released for public comment a draft report analyzing the potential impacts of global climate change on the United States. The report, to be presented to the President and Congress following final review, was prepared by a team of scientists from government, academia and the private sector.

    The report, Climate Change Impacts on the United States: The Potential Consequences of Climate Variability and Change, provides the most detailed look ever at the possible impacts of global warming on the United States over the next 100 years.

    Among its key findings, the draft report indicates that continued growth in worldwide emissions is likely to increase average temperatures across the United States by 5-10 degrees Fahrenheit by 2100; impacts such as heavier precipitation and increased drought will vary widely from region to region; some natural ecosystems are likely to disappear entirely and others may be severely disrupted; changes in rain and snowfall patterns could affect the availability of fresh water; and crop productivity is likely to rise nationally, although regional cropping patterns may change significantly.

    "Our work clearly indicates that climate change is a serious issue for the United States," said ecologist Anthony Janetos of the World Resources Institute, a co-chair of the scientific team that led the analysis. "One of the things that makes this assessment unique is the extensive public participation in defining issues of concern. We hope that many more people will take advantage of the review period to take a close look at our findings and conclusions."


  3. Astronaut Photographs Show Changes On Earth, NASA/Johnson Space Center/SDM Next Article Bookmark and Share

    Excerpts: (...) Their photographs are providing important new insights into how nature and humans are changing planet Earth.

    Some of these photographs will be published this month as part of a new book of the results of imagery analysis in such areas as urban growth, El Niño impacts, and changes in sea levels, coastal vegetation and land use. A collaborative effort between NASA and Russian Aviation and Space Agency Earth observation experts, Dynamic Earth Environments: New Observations from Shuttle-Mir Missions will include 16 pages of color photographs taken by astronauts and cosmonauts on Mir between March 1996 and June 1998. (...)

    By observing and documenting surface dynamics and processes over time, scientists can gain a better understanding of the forces – both natural and human-induced – that change the Earth. Some of the 22,000 photographs taken by the Mir astronauts capture natural phenomena for the first time, such as lakes in the Andes Mountains drying up. (...)

    “This imagery provides us with a global perspective on the rhythms and spatial scale of important natural and human-induced events taking place on the Earth’s surface,” Lulla said. “If the experiences of the Shuttle-Mir crews are typical, Earth observations by crewmembers on the International Space Station will greatly improve both our database and our understanding of processes and changes on the Earth,” he added. (...)


  4. A Complex Systems Approach to Knowledge Management, L.M. Rocha Next Article Bookmark and Share

    Abstract: We discuss how distributed designs that draw from biological network metaphors can largely improve the current state of information retrieval and knowledge management of distributed information systems. In particular, an adaptive recommendation systems named TalkMine was discussed in more detail.

    TalkMine operates at the semantic level of keywords. It leads different databases to learn new and adapt existing keywords to the categories recognized by its communities of users using distributed algorithms. It explores the collective behavior of agents to re-combine the knowledge stored in information resources, thus producing novel associations.

    TalkMine was developed to introduce a linguistic, interactive layer to purely associative designs of distributed information systems. This way, TalkMine adds a conversational layer to an associative network of keywords associated with documents stored in a database. This conversational layer allows users to simultaneously search different sub-networks, creating linguistic categories that represent the present, temporary, interests of an user. The system uses an interactive (conversational) process that directs the spread of activation according to the specific interests of the user, rather than an undirected spreading activation process typically employed in associative models. The interactive process is based on reducing the uncertainty content of constructed categories.

    The final (low uncertainty) categories reached from interaction with a community of users, are utilized as an adaptation signal. With Hebbian learning rules, the associations between keywords adapt to the semantic expectations of the community of users. Because several sub-networks are searched simultaneously, creativity in the form of new associations across contexts can occur.

    TalkMine is currently being implemented for the research library of the Los Alamos National Laboratory under the Active Recommendation Project, where it is being integrated with a similar system for adaptation of citation and hyperlink structure developed by Bollen (@ApWeb). Both systems constitute a biologically motivated information retrieval system, recommending simultaneously at the level of user knowledge categories expressed in keywords, and at the level of individual documents and their associations to other documents. Rather than passive information retrieval, with this system, users obtain an active, evolving interaction with information resources.


  5. Complex Systems and Education Meeting, J. Kaput Next Article Bookmark and Share

    Excerpts: Folks were able to identify instances where major changes in the education patterns in particular professions were triggered by high profile exemplars promoted by prestigious institutions, e.g., Harvard Med in medical ed. (A similar thing happened with the use of cases in business ed as well, if I recall correctly.) Such new directions also seemed to follow a period of dissatisfaction with the status quo. Steve Small pointed out that there is a new initiative, responding to the recent alarming study on medical safety, to introduce systems thinking to doctors and the medical profession. At this point there is no parallel disaster report in public education, (although there have been generic calls for action in the past - Sputnik, Crisis-reports of the early 80's, and the more recent Goals 2K stuff based in international comparisons. The latest has transmogrified into the accountability/high stakes testing wave that may, in fact, lead to the next big disaster and point of departure.

    It was pointed out that institutions seem to have "tipping points" where a strong specific example seems to make a big difference in larger practice - again, Steve pointed to examples in medicine. We also discussed the many huge, pervasive changes that simply seem to happen - cars determining the structure of the 20th century US landscape, TV determining how people spend time, are entertained & are sold-to, and most recently, the internet. What would it mean for such a multifaceted, multileveled and wide-reaching institution as Education to "tip?" (...)

    The two highly successful recent NECSI conferences, one Seattle and the other in NH, have generated a body of material and accumulated additional serious credibility among serious scientists that is ready to be exploited. As an example of an example, we discussed the Alan Perelson / David Ho "early HIV/AIDS treatment" Complex Systems success based on the discovery of the HIV - immune system battle during the "latent phase." It has the features of being immediately understandable in a qualitative way, can be back-filled with curriculum material that is already available (e.g., predator prey models), it can be scaled upward in the direction of the multicomponent models that were used in more careful modeling, can be rendered interactive via reusable software technology that can likely take the form of accessible applets, can be extended horizontally to be used in teacher-education activities and in informal education contexts, and can be generalized for use in every field (dynamic response). In addition, transcripts of Perelson's conference session are being made and, with his help, other resources from his and closely related work can be drawn. (...)


  6. Do Cockroaches 'Know' About Fluid Dynamics?, Science Next Article Bookmark and Share

    For scientists cockroaches are a kind of super-insect: Their adaptability is a nightmare if they are considered pests, but on evolutionary scales it is a fascinating achievement from which we can learn about survival in hostile environments. Cockroaches had to develop defenses against being swatted or eaten by fast predators.

    Besides having developed a highly specialized anatomy for running away from danger (cockroaches have been claimed to hold the land speed record, relative to body size) they also appear to have developed highly sophisticated ways to sense an approaching rolled-up newspaper. Rinberg et al. studied how the wind sensors in the antennae of the American cockroach (Periplaneta americana) respond to spectral wind properties. For instance natural airflow has a very broad-band, noisy spectrum that the cockroach learned to ignor. But if narrowband, low-frequency components in the spectrum build up, the cockroach interprets that change as a signal for an approaching predator. The researchers conclude:

    " It is evident (…) that the average firing rate of the cockroach interneurons conveys information about the spectral properties of the prevailing air movement, which change when a predator approaches. Thus, the insect's awareness of these properties and its ability to detect deviations from the norm - in the form of an excess of low-frequency winds - may help it to survive."

  7. New Antibiotics Effective Against Many Bacteria, American Chemical Society/SDM Next Article Bookmark and Share

    Excerpt: (...) Like weeds in a garden, disease-causing bacteria resist our efforts to stamp them out. Now researchers have a new tool to address the growing problem of antibiotic resistance. The achievement is reported in the May 31 edition of the Journal of the American Chemical Society, a peer-reviewed journal of the world's largest scientific society.

    The researchers focused on aminoglycosides, a family of antibiotics that includes drugs such as neomycin, used in common ointments like Neosporin®. This class of antibiotics faces threats from its inherent high toxicity and its susceptibility to chemical modifications that allow bacteria to resist the drug's effects.

    Bacteria, which create the proteins they need to survive, are constantly evolving and mutating in ways that circumvent the activity of antibiotics. To get around this problem, the researchers found a way to bind the antibiotic to the bacteria's protein-making machinery (called ribonucleic acid, or RNA). This prevents the formation of proteins that allow the bacteria to become resistant to antibiotics, according to Chi-Huey Wong, lead author for research team at the Scripps Research Institute in California.

    The approach could yield an antibiotic approximately 1,000 times more effective than the original antibiotic, so a much smaller dose would suffice, Wong said.

    "By studying the bacterial genome, we were able to find a way to attack antibiotic resistance," Wong said. "We used it as a new way to find the secrets of resistance."

    More than 100 antibiotics are currently on the market to fight infections, including those suffered by cancer and AIDS patients, people recovering from surgery and others. They work by preventing the growth of bacteria that lead to infections.

    Wong said the researchers worked with aminoglycosides because they function differently than other antibiotics, preventing the formation of proteins that allow bacteria to live, instead of attacking the proteins after they are formed. The same method might be used to develop anticancer and antiviral agents, he added.

    Although human testing is expected to begin within six months, any solution to the problem of antibiotic resistance is temporary, Wong said.

    "The best we can do is slow down the development of resistance," Wong said. "It's just a matter of time with bacteria. It's simply evolution - bacteria will do anything to survive."


  8. Resource for Complex Physiologic Signals, Circulation Next Article Bookmark and Share

    Abstract—The newly inaugurated Research Resource for Complex Physiologic Signals, which was created under the auspices of the National Center for Research Resources of the National Institutes of Health, is intended to stimulate current research and new investigations in the study of cardiovascular and other complex biomedical signals. The resource has 3 interdependent components. PhysioBank is a large and growing archive of well-characterized digital recordings of physiological signals and related data for use by the biomedical research community. It currently includes databases of multiparameter cardiopulmonary, neural, and other biomedical signals from healthy subjects and from patients with a variety of conditions with major public health implications, including life-threatening arrhythmias, congestive heart failure, sleep apnea, neurological disorders, and aging. PhysioToolkit is a library of open-source software for physiological signal processing and analysis, the detection of physiologically significant events using both classic techniques and novel methods based on statistical physics and nonlinear dynamics, the interactive display and characterization of signals, the creation of new databases, the simulation of physiological and other signals, the quantitative evaluation and comparison of analysis methods, and the analysis of nonstationary processes. PhysioNet is an on-line forum for the dissemination and exchange of recorded biomedical signals and open-source software for analyzing them. It provides facilities for the cooperative analysis of data and the evaluation of proposed new algorithms. In addition to providing free electronic access to PhysioBank data and PhysioToolkit software via the World Wide Web, PhysioNet offers services and training via on-line tutorials to assist users with varying levels of expertise.

  9. Neandertal Diet: Mostly Meat, Washington University In St. Louis/SDM Next Article Bookmark and Share

    Excerpts: New scientific testing resolves the long-standing debate over whether the Neandertals were merely scavengers who snatched the leftovers of nature's predators or were themselves high-level carnivores with adept hunting skills. (…)

    Through bone-chemistry analyses, the team determined the Neandertals must have feasted on meat. The Neandertal diet - which may have included mammoths - was similar to other top-level carnivores from the time period, such as wolves and lions, the researchers said. (…)

    The scientists analyzed a jawbone and skull bone from two Neandertals recently dated to about 28,000 years old. The fossils were recovered at the Vindija cave site, located about 34 miles north of the Croatian capital of Zagreb. Researchers then compared the bone composition with other central European animals of the same time period, including wolves, wild cattle, mammoths, arctic fox and cave bear.

    Smith noted: "For several decades, archaeologists have debated the importance of meat in the Neandertal diet, but this question never has been answered unequivocally. Our findings provide conclusive proof that European Neandertals were top-level carnivores who lived on a diet of mainly hunted animal meat."

    By itself, archaeological evidence - in the form of remains of animal bones and stone tools that were used for hunting - provides only a glimpse of Neandertal diets. Some scientists have argued that there was little evidence that the Neandertals were accomplished hunters.

    "We've known meat clearly was a part of the diet of the Neandertals, but it was impossible, from the archaeological evidence alone, to see the actual proportion of meat in their diets," Smith said. "Stable-isotope analysis yields a direct measure of human diet, since our bones record the isotope signatures of the foods we ate in our lifetimes. By measuring these isotope signatures in fossil bones, we can reconstruct aspects of the diets of humans and animals from the past."

    The new evidence suggests the European Neandertals may have eaten almost exclusively meat. "It's still hard for us to know for certain, but it doesn't appear that they were getting much in the way of nutrients from something other than meat," Smith said.

    Trinkaus added: "The isotope data - combined with archaeological analysis of faunal remains and tools found with the Neandertal fossils - indicate that hunting of mammals was a major element of their subsistence. Conversely, plant foods are almost invisible in the archeological record, making it impossible to estimate accurately their dietary importance." (…)

    In a study last fall involving Vindija fossils, members of the same research team documented through radiocarbon dating that the Neandertals roamed central Europe as recently as 28,000 years ago, representing the latest date ever recorded for Neandertal fossils. These previous findings - combined with recent evidence of late Neandertal survival in Iberia and of Neandertal-modern human interbreeding in Portugal, the latter of which also was published in PNAS - indicate that the Neandertals were able to coexist and interact successfully with early modern humans spreading across Europe at the time.

    "The new bone-chemistry data combined with evidence of sustained Neandertal coexistence and interbreeding with early modern humans offer a positive picture of the Neandertals and may make it easier for some to accept the possibility that the Neandertals were among the ancestors of early modern humans," said Trinkaus, professor of anthropology in Arts and Sciences.


  10. Novelty Detection on a Mobile Robot Using Habituation, arXiv Next Article Bookmark and Share

    Abstract: In this paper a novelty filter is introduced which allows a robot operating in an unstructured environment to produce a self-organized model of its surroundings and to detect deviations from the learned model. The environment is perceived using the robot's 16 sonar sensors. The algorithm produces a novelty measure for each sensor scan relative to the model it has learned. This means that it highlights stimuli, which have not been previously experienced. The novelty filter proposed uses a model of habituation. Habituation is a decrement in behavioral response when a stimulus is presented repeatedly. Robot experiments are presented which demonstrate the reliable operation of the filter in a number of environments.

  11. Links & Snippets Next Article Bookmark and Share


    1. World Congress on Information Technology (WCIT), Synopsis Next Article Bookmark and Share

      Abstract: We provide a fast algorithm to calculate the m-dimensional distance histogram on which Brock, Dechert, and Sheinkman's (1987) BDS-type statistics are based. The algorithm generalizes a fast algorithm due to LeBaron by calculating the histogram for any finite set of distances simultaneously, and also using induction in m. By reordering the calculation appropriately, the algorithm also requires less memory and time. The two algorithms are compared using LeBaron's MS-DOS implementation in C and our Delphi (Windows Pascal) program. The generalized algorithm is faster when more than a few values of m and M (the distance parameter) are required, and is set up to calculate up to 255 values using short-integer arithmetic.
      Abstract: Near-neighbor regression is a popular empirical tool. In this note, we describe the general algorithm for the technique and we identify several potential problem areas that researchers should consider. Standard statistical packages are generally inflexible, and hide important modeling decisions from the researcher. We provide code for a simple but very flexible routine that readers can customize for their own use.

    2. 2 Electronic-Signature Bill Is Passed by U.S. House, New York Times Next Article Bookmark and Share

      Abstract: We provide a fast algorithm to calculate the m-dimensional distance histogram on which Brock, Dechert, and Sheinkman's (1987) BDS-type statistics are based. The algorithm generalizes a fast algorithm due to LeBaron by calculating the histogram for any finite set of distances simultaneously, and also using induction in m. By reordering the calculation appropriately, the algorithm also requires less memory and time. The two algorithms are compared using LeBaron's MS-DOS implementation in C and our Delphi (Windows Pascal) program. The generalized algorithm is faster when more than a few values of m and M (the distance parameter) are required, and is set up to calculate up to 255 values using short-integer arithmetic.

    3. 3 A Generalized Fast Algorithm for BDS-Type Statistics, SNDE Next Article Bookmark and Share

      Abstract: Near-neighbor regression is a popular empirical tool. In this note, we describe the general algorithm for the technique and we identify several potential problem areas that researchers should consider. Standard statistical packages are generally inflexible, and hide important modeling decisions from the researcher. We provide code for a simple but very flexible routine that readers can customize for their own use.

    4. 4 Time-Series Near-Neighbor Regression, SNDE Next Article Bookmark and Share

      Abstract: The tectonics of Europa, one of Jupiter's moons, are complex. This satellite probably hosts a subsurface water ocean, but the thickness of the outer ice crust is poorly constrained and the episodic presence of liquid water at the surface is debated. We argue that some surface features of Europa are formed by soft ice that is heated by viscous dissipation of tidal motion along faults, and do not depend on a shallow ocean. Our model suggests that transient pockets of liquid water or brine could form at shallow depths in the crust.

    5. 5 Tectonics And Water On Europa, Nature Next Article Bookmark and Share

      Excerpt: (...) The legislation, passed 426 to 4, would give new technologies like fingerprint scans and encryption keys the legal weight of ink-and-paper signatures, making it easier for both companies and consumers to do business online. The Senate is expected to pass the bill later this week and the President said today that he would sign the law, which is a compromise that took high-technology companies, the financial industries lobby and consumer groups nearly a year to negotiate. (...)

    6. 6 Genetic Analysis Yields Intimations of a Primordial Commune, New York Times Bookmark and Share

      This is a good overview of the discussion on the origins of life on earth as a background for the story about the claimed discovery of 3 Billion year old fossils of microbes:

      "The chemistry of the first life is a nightmare to explain. No one has yet devised a plausible explanation to show how the earliest chemicals of life -- thought to be RNA, or ribonucleic acid, a close relative of DNA -- might have constructed themselves from the inorganic chemicals likely to have been around on the early earth. The spontaneous assembly of small RNA molecules on the primitive earth "would have been a near miracle," (…)"


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