mx.unam.iimas.griffin.grn.util

Class TransitionRelation

java.lang.Object

mx.unam.iimas.griffin.grn.util.TransitionRelation

Direct Known Subclasses:

AsynchronousTransitionRelation, SynchronousTransitionRelation

public abstract class TransitionRelation
extends java.lang.Object

Asynchronous transition relation for a Boolean Network

Version:

1.0

Author:

Stalin Muñoz Gutiérrez (stalinmunoz@yahoo.com)

Constructor Summary

Constructors

Constructor and Description
TransitionRelation()

Method Summary

Modifier and Type	Method and Description
static java.util.Map<Variable,Variable>	getBackwardMap(BooleanGeneRegulatoryNetwork network) Obtains the Map that relates all prime variables (next time) with their corresponding variables (present time)
static java.util.Map<Variable,Variable>	getForwardMap(BooleanGeneRegulatoryNetwork network) Obtains the Map that relates all variables to their prime versions (next time variables)
static Variable	prime(Variable variable) Obtains the variable representing the given variable for the following time (prime variable)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TransitionRelation

public TransitionRelation()

Method Detail

getForwardMap

public static java.util.Map<Variable,Variable> getForwardMap(BooleanGeneRegulatoryNetwork network)

Obtains the Map that relates all variables to their prime versions (next time variables)

Parameters:

network - the Boolean network

Returns:

the map

getBackwardMap

public static java.util.Map<Variable,Variable> getBackwardMap(BooleanGeneRegulatoryNetwork network)

Obtains the Map that relates all prime variables (next time) with their corresponding variables (present time)

Parameters:

network - the Boolean network

Returns:

the map

prime

public static Variable prime(Variable variable)

Obtains the variable representing the given variable for the following time (prime variable)

Parameters:

variable - the reference variable

Returns:

the prime variable