- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.code.GeneRegulationDeterministicEncoder.HypotheticalRegulationPolicy
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.code.GeneRegulationDeterministicEncoder.StableStatesPolicy
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.explorer.io.AssignmentType
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.explorer.topology.TopologyIteratorType
-
Returns the enum constant of this type with the specified name.
- valueOf(GeneRegulation) - Static method in class mx.unam.iimas.griffin.grn.GeneInteraction
-
Obtains the gene interactions specified in the gene regulation
(Unambiguous version)
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.GeneInteractionType
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.GeneRegulation.Type
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.models.epistasis.InputVariant
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.models.epistasis.MotifVariant
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.grn.models.epistasis.TopologyVariant
-
Returns the enum constant of this type with the specified name.
- valueOf(Variable) - Method in class mx.unam.iimas.griffin.logic.Interpretation
-
The assignment for the given variable
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.logic.Literal.Type
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum mx.unam.iimas.griffin.logic.Operator
-
Returns the enum constant of this type with the specified name.
- valueOf(int, Set<Variable>) - Static method in class mx.unam.iimas.griffin.logic.util.InterpretationUtil
-
Obtains the interpretation of the binary encoded representation
- valueOf(int, List<Variable>) - Static method in class mx.unam.iimas.griffin.logic.util.InterpretationUtil
-
Obtains the interpretation of the binary encoded representation
- valueOf(String) - Static method in class mx.unam.iimas.griffin.logic.Variable
-
The variable for the given name
- values() - Static method in enum mx.unam.iimas.griffin.grn.code.GeneRegulationDeterministicEncoder.HypotheticalRegulationPolicy
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.code.GeneRegulationDeterministicEncoder.StableStatesPolicy
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.explorer.io.AssignmentType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.explorer.topology.TopologyIteratorType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.GeneInteractionType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.GeneRegulation.Type
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.models.epistasis.InputVariant
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.models.epistasis.MotifVariant
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.grn.models.epistasis.TopologyVariant
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.logic.Literal.Type
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum mx.unam.iimas.griffin.logic.Operator
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- VAR_SEPARATOR - Static variable in class mx.unam.iimas.griffin.grn.util.DubrovaAttractors
-
Separator for representing time variables
- Variable - Class in mx.unam.iimas.griffin.logic
-
Propositional variable
- Variable(String) - Constructor for class mx.unam.iimas.griffin.logic.Variable
-
Creates the propositional variable
- VARIABLE_REGEXP - Static variable in class mx.unam.iimas.griffin.logic.parser.SimpleBooleanExpressionParser
-
Regular expression for variable names
- Vertex(T) - Constructor for class mx.unam.iimas.griffin.graph.DirectedHypergraph.Vertex
-
Creates the vertex